Biomedical Information Visualization

Major: Biomedical Engineering (Internet of Things)
Code of subject: 6.163.03.E.094
Credits: 5.00
Department: Electronics and Information Technology
Lecturer: Smerdova Tetyana
Semester: 8 семестр
Mode of study: денна
Learning outcomes: the ability to substantiate the choice and use of existing methods for processing and analyzing signals in biomedical systems (FC-8); the ability to perform segmentation of images obtained during medical research (ultrasound, CT, micro-CT, MRI, etc.) and perform 3D-reconstruction of objects (FC-10);
Required prior and related subjects: «Visualization of signals in biomedical research», «Biomedical research equipment», «Digital processing of biomedical signals», «Methods and techniques of diagnostic research and therapeutic effects»
Summary of the subject: Introduction to diagnostic equipment 1. Types and means of diagnostic effects. Characteristics of tissues and methods of diagnostic effects. 2. Laboratory equipment. Biochemical analyzers. Microscopes. Nature of research and their purpose 3. Functional diagnostics. Tomography. Ultrasound Nature of research and their purpose Modern methods of forming biomedical images 4. Electronic and ultraviolet microscopes in biomedical research. Use of modern microscopes in the study of the patient's condition. Fluorescent microspin. Transmission electron microscope. 5. Roentgenology. General characteristics of X-ray machines. Getting a diagnostic image with modern X-ray tomographs. 6. Computer tomography. Magnetic resonance imaging. Positron-emission tomography Biomedical images in DICOM format 7. DICOM format. Features of receiving and storing BM information in DICOM format. 8. DICOMviewer. Functions and work with the software package. The main features of the software package. 9. Analysis of DICOM images. Processing and improving images for the needs of healthcare workers and the use of hardware and software. Digital Image Processing 10. Types of medical imaging. Resolution. Histogram image 11. Methods of preliminary processing of two-dimensional biomedical images. Filtering, contouring, normalization. 12. Optimization of images. Histogram transformation and contrast enhancement. Non-linear enhancement of contrast. 13. Converting multiple images. Background subtraction. Correction of uneven lighting. Processing of moving objects. Biomedical Imaging Analysis 14. Automated image processing systems. Appointment. Components Ways of further development. 15. Specialized systems for processing and analyzing images of microobjects. Confocal microscopy. Flouriscent probes. Formation of two-dimensional and three-dimensional images. 16. Contemporary software products for the analysis of biomedical images. The main functionality. Directions of development ..
Assessment methods and criteria: Written reports on practical work, oral questioning, control work (30%) -command control (offset); written oral form (70%)
Recommended books: 1. Бисерова М.Н. Методы визуализации биологических структур – М.: МГУ им.Ломоносова, 2013. – 104 с. 2. Физика визуализации изображений в медицине. В 2-х томах – под. ред. С. Уэбба– М., Мир, 1991. — ISBN 5-03-001925-5 3. Королюк И.П., Линденбратен Л.Д. Лучевая диагностика - М.: БИНОМ, 2013. – 496 с. 4. Рычагов М.Н. Ультразвуковая медицинская визуализация - М.: МИЭТ, 2001. - 140 с.